Home (CZ) | Teaching (CZ) | NMST552 |
Rko (CZ) |
Language of both lectures and all exercise classes is English if and only if there is at least one officially subscribed student who is not enrolled in the Czech study programme.
| Lectures: | Monday 11:00 in K4 and 12:20 in K1 |
| Exercise class: | Monday 14:00 in K1 |
Division into "lecture" and "exercise class" is just formal. The style of teaching ("lecture"/"exercise class") will change dynamically over the semester. The teaching part will be finalized on April 24.
| Lecture slides: | PDF (last change 02/04/2023) | ||
| R script: | Vaha_lehkych1.R | ||
| Exercise assignment 1: | PDF (updated on 03/03/2023) | ||
| Exercise 2, R script: | R script (published on 20/03/2023) | ||
| Data (mastitis) | |||
| Exercise assignment 3: | PDF (published on 27/03/2023) | ||
| Data (toenail) | |||
| Exercise assignment 4: | PDF (published on 16/04/2023) | ||
| Data (Cars2004) | |||
Next to R, we will also use JAGS (Just Another Gibbs Sampler) which can be downloaded (for various platforms) here (latest version seems optimal, read README first...):
| Source code (to compile) |
| DEB for Debian Linux |
| Package for Ubuntu Linux |
| RPM based Linux distributions |
| Mac OS X |
| Windows bin |
User manual to JAGS can be found here. Installation manual (if needed) is here. Examples of JAGS analyzes are here. As a study material, practical exercises from the short course given at UseR conference can be useful. Solutions to the exercises are here.
To be able to call JAGS from R, package runjags available in a standard way from CRAN is needed.
| Hušková, M. (1985). | |
| Bayesovské metody (course notes in Czech). | |
| Praha: Univerzita Karlova v Praze. | |
| Robert, C. P. (2001, 2007). | |
| The Bayesian Choice: From Decision-Theoretic Foundations | |
| to Computational Implementation, Second Edition. | |
| New York: Springer. | Information on the publisher's web |
| Marin, J.-M., Robert, C. P. (2007). | |
| Bayesian Core: A Practical Approach to Computational Bayesian Statistics. | |
| New York: Springer. | Information on the publisher's web |
| Gelman, A., Carlin, J. B., Stern, H. S., Rubin, D. B., Dunson, D. B. (2014). | |
| Bayesian Data Analysis, Third Edition. | |
| Boca Raton: Chapman & Hall/CRC. | Information on the publisher's web |
| Carlin, B. P., Louis, T. A. (2008). | |
| Bayesian Methods for Data Analysis, Third Edition. | |
| Boca Raton: Chapman & Hall/CRC. | Information on the publisher's web |
| Robert, C. P., Casella, G. (2004). | |
| Monte Carlo Statistical Methods, Second Edition. | |
| New York: Springer. | Information on the publisher's web |