Hello, I am

Jana Brunátová

PhD student | Charles University in Prague & University of Groningen

Who am I ?

I am a double-degree PhD student of Mathematical Modeling at Charles University in Prague and at the University of Groningen. My research is focused on blood flow modeling in brain aneurysms.

Keywords: computational fluid dynamics; cardiovascular hemodynamics; medical imaging (PC-MRI).

Currently, I am in the fourth year of my PhD studies.
We use open-source libraries FEniCS and PETSc in Python to perform the numerical simulations and VMTK or GMSH software for mesh preparations.

Extracurricular activities

An active member of the SIAM Student Chapter Prague

Our Chapter regularly organize seminars and guest lectures mainly for PhD students as well as some introductory courses (LaTeX, FEniCS) for younger students.

A member of the AlumNode network

AlumNode is a global alumni network with an interdisciplinary community made of researchers, experts and science communicators.

An enthusiast of making figures in LaTeX using PGFPlots.

You can check out this repository! I will add more documents soon!

An organisor of the Student Workshop on Applied Mathematics (November 2022)

The workshop was funded by 4EU+ Alliance.

Personal Info

My Resume

Conferences

06/2024 CMBE24
Computational and Mathematical Biomedical Engineering
06/2024 FEniCS2024
FEniCS Conference 2024

05/2024 HPCSE 2024
High Performance Computing in Science and Engineering 2024

My poster can be found here.

09/2023 10th HLF
10th Heidelberg Laureate Forum
09/2023 BioPhysMed 2023
Workshop on Biophysics-based modeling and data assimilation in medical imaging
06/2023 FEniCS2023

My slides can be found here.

09/2022 VPH 2022
Virtual Physiological Human

My poster can be found here.

06/2022 CMBE22

My slides can be found here.

Education

2021 - Present

PhD candidate (CU & RUG)
Mathematical and Computer Modeling

Supervisors: RNDr. Jaroslav Hron, Ph.D.
& Prof.dr. Cristóbal Bertoglio

Thesis: Computational modeling of blood flow from medical images

2019 - 2021

MS Mathematical and Computer Modeling in Physics

Supervisor: RNDr. Jaroslav Hron, Ph.D.

Master Thesis: Blood Flow Modeling in Cerebral Aneurysm
Full text can be found here.

Publications

  1. Hejčl A, Brunátová J, Švihlová H, et al. (2024) Rupture point is associated with divergent hemodynamics in intracranial aneurysms. Front. Neurol. 15:1364105. doi: 10.3389/fneur.2024.1364105
  2. Brunátová J, Löcke M,Uribe S, Bertoglio C. Denoising of dual-VENC PC-MRI with large high/low VENC ratios. Magn Reson Med. 2025;93:353-368. doi:10.1002/mrm.30278
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My work in pictures

Intro From papers Videos All

Denoising of synthetic PC-MRI measurements

Particle tracking in an aneurysm using the simulated velocity field. Velocity waveform is shown on the left.

Send me a message



Get in touch

Email:
brunatova@karlin.mff.cuni.cz
j.brunatova@rug.nl
Address:
Sokolovská 366,
186 00 Praha 8-Karlín

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